yabD
M129

similar to TatD-related deoxyribonuclease

locus

MPN009

function

DNA synthesis/modifications/repair/conformation

product

Uncharacterized deoxyribonuclease MPN_009 (EC 3.1.21.-)

28710

3.1.21.-

8.23

synonyms

TatD,YcfH

Gene length

786 bp Sequence Blast

Protein length

261 aa Sequence Blast

essential

Outlinks

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0084

This gene is a member of the following regulons

gene

coordinates

11275 → 12060 (+)

the protein

catalyzed reaction/ biological activity

DNAn + H2O = DNA(n-1) + dNMP, reversible reaction

localization

cytoplasm

cofactors

Mg2+

protein family

Metallo-dependent hydrolases superfamily (according to UniProt)

structure

[PDB|1YIX] from E.coli, TatD-related deoxyribonuclease Ycfh (33% identity)

[AF|P78005]

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Time of last update: 2024-04-03 15:44:55

Author of last update: Sojhi